Statistics‎ > ‎

DESeq2


  • requires table of integer values (count data) 

→ Install
source("http://bioconductor.org/biocLite.R")
biocLite("DESeq2")

Help
help(package="DESeq2",help="html")

→ Run DESeq2 on a data matrix


Reference
citation("DESeq2")

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
InstallMichael I Love, Wolfgang Huber, and Simon Anders.
Genome Biology 2014 15:550



Subpages (2): Example Install