Install

# Ubuntu: install additional packages required for DESeq2

sudo apt-get install libxml2-dev

sudo apt-get install libcurl4-openssl-dev

# install DESeq2 from Bioconductor.org

sudo R # start R as superuser

> source("http://bioconductor.org/biocLite.R")

> biocLite("DESeq2")

http://bioconductor.org/packages/release/bioc/html/DESeq2.html